Best Accounting Software for Amazon Sellers in 2023


The best accounting software for Amazon sellers should offer inventory management, automated sales tax calculations, comprehensive reporting capabilities, and seamless integration with ecommerce platforms. A must-have feature for Amazon sellers is accounting software that tracks the cost of goods sold (COGS) automatically, which is why our list below is quite short.

Here are the four best accounting software for Amazon sellers:

  • QuickBooks Online: Best overall accounting software for Amazon sellers
  • Zoho Books: Best Amazon sellers accounting software for shipping fulfillment support
  • Sage 50cloud: Best desktop accounting software for Amazon sellers
  • Xero: Best for Amazon sellers with multiple users

Comparison of Best Accounting Software for Amazon Sellers

QuickBooks Online: Best Overall Accounting Software for Amazon Sellers


  • Inventory management with Plus and Advanced plans
  • Calculates sales tax rates to apply to an invoice automatically based on address
  • Integration with dozens of apps commonly used by Amazon
  • Capable mobile app


  • Subscriptions can be more expensive compared to competitors
  • Some accounting knowledge required to use software
  • No customer service telephone number
  • Doesn’t support the average cost method of inventory accounting


QuickBooks Online offers a choice of four subscription plans, although only Plus and Advanced have the features that are useful for Amazon sellers, such as inventory tracking.

  • Plus: $85 per month for up to five users
  • Advanced: $200 per month for up to 25 users

You can subscribe for QuickBooks Online’s 30-day free trial or sign up right away to get 50% off for the first three months.

We selected QuickBooks Online as the overall best accounting software for Amazon sellers because of the strong inventory management features in its Plus and Advanced plans. It can handle purchase orders (POs) and inventory costs and to calculate sales tax for sales in different jurisdictions.

It also excels in the area of integrations, with the ability to connect to dozens of apps used by Amazon. If you need assistance with the software, you have access to independent QuickBooks ProAdvisors, or you can sign up for QuickBooks Live, its online bookkeeping service provider.

  • Accounting for ecommerce: Accounting for ecommerce is a feature you can use for your sales channels, like Amazon, Shopify, and eBay. It syncs your sales orders for viewing and downloads your payouts, but it doesn’t connect to your inventory. Both the Plus and Advanced plans offer unlimited connections to Amazon, Shopify, and eBay—and to any other platforms that are added in the future.
  • Inventory management: Available with the Plus and Advanced plans, QuickBooks Online allows Amazon sellers to track stock items and quantities, update inventory quantities automatically, and organize items by their taxable or nontaxable status. You can also generate POs, which assists with tracking stock levels.
  • Sales tax calculation: QuickBooks Online will automatically calculate sales tax based on the location of your customer and track it for easy filing, which is an enormous timesaver if you ship products to multiple states.
  • Extensive reporting: QuickBooks Online’s reports are very customizable, and you can track by class and location to determine profitability across multiple stores or sales channels. You can also filter the reports to retrieve the data you’re seeking.
  • Native integrations: QuickBooks Commerce and Amazon Seller Connector by QuickBooks integrate seamlessly with QuickBooks Online, making it easier to sync your inventory and sales data with your Amazon seller account.
  • Ecommerce retailers seeking scalable software that integrates with Amazon: We selected QuickBooks Online as the overall best ecommerce accounting software because of its subscription plans that scale as your business grows. It also has more direct integrations with ecommerce sites than other accounting software like Xero.
  • Amazon sellers who need accounting software with inventory management: If you sign up for Plus or Advanced, you have access to QuickBooks Online’s inventory management features, including inventory and cost tracking, automatic updates, bundles and assemblies, reordering and alerts, and reports.
  • Those selling in multiple states: QuickBooks Online calculates sales tax automatically based on a customer’s address, which is especially useful when Amazon sellers have customers in multiple states.

Zoho Books: Best Amazon Sellers Accounting Software for Shipping Fulfillment Support


  • Zoho Inventory integrates with Amazon directly
  • Robust mobile app
  • Integration with Avalara for sales tax compliance
  • Feature-packed and more affordable than competitors


  • No access to ecommerce integrations unless you subscribe to Zoho Inventory or Zoho Flows
  • Unable to determine sales tax by location
  • Only email support is available with free plan
  • Unable to file sales tax returns


Zoho Books offers a free plan for businesses with annual revenues of $50,000 or less. This allows you access for one user and accountant. There are also five paid plans, which vary in price based on the number of users and available features. Additional users are $3 per user, per month:

  • Standard: $20 per month for up to three users and 500 customers and vendors
  • Professional: $50 per month for up to five users
  • Premium: $70 per month for up to 10 users
  • Elite: $150 per month for up to 10 users and advanced inventory control
  • Ultimate: $275 per month for up to 15 users, 25 custom modules, and advanced analytics

The provider also offers a 14-day free trial.

We selected Zoho Books as the best accounting software for Amazon sellers seeking shipping fulfillment support because of its strong inventory management tools. These include shipment tracking, batch tracking, the ability to print shipping labels, serial number tracking, and the capacity to manage up to five warehouses.

However, it is important to note that in addition to Zoho Books, you’ll need to pay for Zoho Inventory if you want an Amazon integration. Zoho Books is free for businesses with $50,000 or less in annual revenue, although it lacks access to many features, including advanced inventory control.

  • Inventory management: Available with the Elite and Ultimate plans, Zoho Books has complete inventory tracking features for tracking stock levels. Using Zoho Inventory, you can connect your Amazon seller account to ensure that your inventory levels are always up-to-date.
  • Mobile app: Zoho Books tops our list of the best mobile accounting apps because of its ability to perform all of the tasks as on the web interface, including sending invoices, receiving payments, viewing reports, and capturing expense receipts. This is extremely helpful when working on the road.
  • Direct integrations: The solution integrates with a variety of other Zoho apps, including Zoho CRM, Zoho Expense, Zoho Analytics, and Zoho People. This helps streamline your workflow and ensures that all of your information is easily accessible.
  • Advanced analytics: The Elite plan provides advanced analytics that allows you to view customizable reports and dashboards in real time. You can analyze and track key financial metrics and collaborate with colleagues to create reports.
  • Multicurrency capabilities: Zoho Books offers multicurrency capabilities for all of its paid plans, but if you sign up for Premium or Elite, you’ll have access to advanced multicurrency handling. This includes the ability to create transactions in more than one currency for each of your customers.
  • Businesses on a budget with less than $50,000 in annual revenue: Zoho Books is free for businesses with less than $50,000 in annual revenue, and while it may not give you access to all of its features (such as advanced inventory and advanced analytics), it does have a robust feature set for free accounting software.
  • Amazon sellers who need assistance with shipping fulfillment: The Elite and Ultimate plans provide advanced inventory control, which includes warehouse management, serial number tracking, batch and shipment tracking, and the ability to print shipping labels.
  • Amazon sellers who want strong customer support options: If your access to customer support is important, then any one of Zoho Books’ paid plans is a good fit for you because they all offer access to email, voice, and chat support.

Sage 50cloud: Best Desktop Accounting Software for Amazon Sellers


  • Powerful inventory management features
  • Sell in multiple currencies
  • Accessible customer support
  • Connect to the cloud with Remote Data Access or Microsoft OneDrive
  • Strong reporting and analytics tools


  • Expensive for multiple users
  • Must download and install on computer
  • Mobile app only captures receipts
  • Can have a steep learning curve


Sage 50cloud has three plans available at either a monthly or annual billing option. Prices vary based on the number of users and available features:

  • Pro Accounting: $57.17 per month or $578 per year for one user
  • Premium Accounting: $96.58 to $222.25 per month or $970 to $2,222 per year for up to five users
  • Quantum Accounting: $160 to $409.17 per month or $1,610 to $4,108 per year for up to 10 users (custom price for 11 or more users)

The software easily integrates with Amazon Seller Central via A2X, so you can keep track of your business finances and orders in one place. It offers competitive inventory management features, like automatic accounting for COGS and the computation of the cost of ending inventories.

Its ability to track sales tax and Microsoft 365 integration are also useful for Amazon sellers. Sage 50cloud is also scalable, and it can accommodate multiple users in its Premium Accounting and Quantum Accounting plans.

  • Inventory management: Sage 50cloud lets you track your inventory levels, monitor stock movements, and set up alerts or low stock or ordering. This helps ensure you have enough stock to meet customer demands.
  • Sales tax tracking: Although it’s not possible to file and pay your sales tax liability directly through the software, Sage 50cloud allows you to track sales tax and set up tax rates.
  • Scalability: Sage 50cloud is designed to scale with your business. As your Amazon selling operations grow, you can easily add more customers, products, and transactions without experiencing significant performance issues. The software also offers customizable features and reports, allowing you to adapt it to your needs.
  • Integration with Amazon: Sage 50cloud integrates with your Amazon seller account using the A2X integration, which allows you to import your sales data directly into the software. This saves you time and reduces the chance of making data entry errors. You can also reconcile your Amazon settlements with your accounting records.
  • Microsoft 365 integration: For an extra $150 per year, you can integrate Microsoft 365 with Sage 50cloud, which will forward all of your customer and vendor information. All of your Sage 50cloud data will also be backed up in Microsoft OneDrive.
  • Amazon sellers with multiple businesses: If you have more than one Amazon store, you can consolidate the financial data from all of your businesses into one financial statement. This makes it easier to analyze information and identify areas for improvement.
  • Amazon sellers who prefer desktop accounting software: Sage 50cloud is the only desktop software on this list, and it is filled with useful features for Amazon sellers. And while it is a desktop program, employees and accountants can access the company file through SageDrive.
  • Amazon sellers seeking accounting software with payroll features: Sage 50cloud includes payroll in its subscription price, which makes it easier if you have employees. Its plans can accommodate up to 10 users so that you can give access to your staff.

Xero: Best Accounting Software for Amazon Sellers With Multiple Users


  • Reconcile your Amazon sales within the software easily
  • Affordable price compared to other accounting software
  • Strong inventory accounting
  • Unlimited users with all plans


  • Must set up sales tax rates manually for each location with a taxable sale
  • No annual billing option
  • Unable to accommodate multiple businesses with one subscription
  • Can’t file sales tax returns


Xero offers a choice of three plans, which range in price based on the number of invoices and bills allowed and other available features. All plans include unlimited users:

  • Early: $13 per month for 20 invoices and five bills
  • Growing: $37 per month for unlimited invoices and bills
  • Established: $70 per month for unlimited invoices and bills, plus multiple currencies

You can sign up for Xero’s 30-day free trial before subscribing to a plan.

Xero is our pick for the best accounting software for Amazon sellers with multiple users because it includes unlimited seats in all plans. It is also a great choice for accounting novices and ecommerce businesses wanting well-rounded accounting software that can connect with their Amazon seller account at an affordable price.

You get access to robust inventory management tools. Also, you can track sales taxes and pay your sales tax liability using Avalara, a software that automates sales tax compliance and will assist with registering for sales tax, obtaining your business licenses, and managing your license portfolio. Visit Avalara to learn more.

  • Unlimited users: Xero supports an infinite number of users for all plans, and if you sign up for either the Growing or Established plans, you’ll have access to unlimited invoices and bills. Plus, multiple Amazon sellers can access the accounting software from a single account.
  • Ease of use: The platform is ideal for accounting novices, as it doesn’t require you to have prior bookkeeping knowledge to use the software successfully. Its user interface is clean and easy to navigate, and there is no accounting jargon to confuse you. It uses double-entry accounting like QuickBooks.
  • Sales tax tracking: You can create sales tax items, charge tax on sales, and adjust sales tax due to credit memos. You can also integrate Xero with Avalara, which automates tax compliance, enabling you to file returns and pay your sales tax liability.
  • Inventory management: Xero allows you to manage inventory items, calculate the COGS automatically, add inventory to invoices, see inventory costs, and determine ending inventory. We selected Xero as one of the top ecommerce accounting software because of the features that allow you to monitor customer orders and payments.
  • Online invoicing: You can create and send invoices and receipts to your customers directly through Xero. What’s more, you can customize invoice templates, add your logo, and set up automated reminders for late payments.
  • Amazon sellers on a budget who need access for multiple users: One of Xero’s most useful features is its ability to accommodate multiple users, no matter which plan you choose. This is especially helpful when you want to enable access for an accountant and members of your team.
  • Amazon sellers seeking bookkeeping support: Bookkeeper360, which provides assisted bookkeeping services, is a Xero Platinum Partner. It offers a wide range of financial services, including bookkeeping, accounts payable and receivable management, and financial reporting. Read our review of Bookkeeper360 for more information about the provider’s services and pricing.
  • Amazon sellers who want a strong inventory tool: Xero’s inventory tracking functionality is useful for calculating your COGS automatically and maintaining a record of your customers. It also lets you track your customers’ payments and orders.

How To Choose the Best Accounting Software for Amazon Sellers

There are several factors to consider to ensure you find the best option for your business. By carefully considering these items, you can make an informed decision and choose the accounting software that best suits your specific needs as an Amazon seller:

  • Your needs: Start by understanding your specific accounting needs as an Amazon seller. Consider the size of your business, the volume of transactions, the complexity of your inventory management, and any specific accounting requirements you may have.
  • Integration with Amazon: Look for accounting software that integrates seamlessly with the Amazon platform. It should be able to import and reconcile your sales, fees, refunds, and other relevant data automatically. This saves time and minimizes errors in data entry.
  • Inventory accounting: To determine the profitability of your business, it is necessary to use accounting software that can handle inventory accounting and track your COGS. This helps to ensure that you have the right products in stock at all times, minimizing the risk of losing out on sales due to inventory shortages.
  • Features and functionality: Evaluate the features and functionality offered by different accounting software options. Key features to consider include invoicing, inventory management, expense tracking, bank reconciliation, financial reporting, tax management, and multicurrency support. Determine which features are essential for your business.
  • Scalability: Consider the scalability of the accounting software. Ensure that it can accommodate your growing business needs and handle increasing transaction volumes effectively. It should be flexible enough to adapt as your business expands.
  • User-friendliness: Ease of use is crucial, especially if you or your team members aren’t accounting experts. Look for software with an intuitive interface and clear navigation. Consider whether it offers helpful tutorials, customer support, or a knowledge base to assist you with using the software effectively.
  • Integration with other tools: Consider whether the accounting software integrates with other tools you use in your business, such as inventory management software, customer relationship management (CRM) systems, or tax software. Integration can help streamline your workflows and ensure smooth data transfer between platforms.
  • Reporting and analytics: Robust reporting capabilities are essential for monitoring the financial health of your business. Look for software that provides detailed financial reports, customizable dashboards, and analytics to help you gain insights into your Amazon sales, expenses, profitability, and cash flow.
  • Pricing: Consider your budget and evaluate the pricing models of different accounting software options. Some software may charge a monthly subscription fee, while others may have a one-time purchase cost. Be mindful of any additional fees for additional users or premium features.

Frequently Asked Questions (FAQs)

Your accounting software should pull the following information from Amazon: sales transactions, fees and expenses, refunds and returns, shipping and fulfillment costs, inventory management, sales tax, payment settlements, and currency conversions. The specific data available for retrieval may vary depending on the specific accounting software you choose and the integration options it offers with Amazon’s application programming interface (API) or third-party apps.

Yes, both QuickBooks Online and Xero are widely used accounting software that integrates with Amazon. They offer features designed specifically for Amazon sellers and provide robust accounting functionality.

Yes, many accounting software options provide features to assist with sales tax calculations for Amazon sellers. They can automate the calculation of sales tax based on transaction data, determine the appropriate tax rates, and generate reports to help with sales tax compliance.

Bottom Line

Selecting the best Amazon sellers’ accounting software is crucial for efficient financial management. While several options are available, QuickBooks Online, Sage 50cloud, and Xero all offer robust features such as seamless integration with Amazon, inventory management, sales tax support, and multiuser collaboration. Meanwhile, Zoho Books is a good choice for Amazon sellers seeking access to other useful integrations, such as Zoho Inventory.

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